Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6912 family protein | AMED_RS40850 | Not Available | Negative | 8777642 - 8778133 | 17221.3 |
| wax ester/triacylglycerol synthase family o-acyltransferase | AMED_RS40855 | Not Available | Negative | 8778130 - 8779536 | 50491.7 |
| rna methyltransferase | AMED_RS40860 | Not Available | Positive | 8779571 - 8780332 | 26107.7 |
| had-ia family hydrolase | AMED_RS40865 | Not Available | Negative | 8780336 - 8780707 | 12941.3 |
| rv3235 family protein | AMED_RS49620 | Not Available | Positive | 8780896 - 8781354 | 17135.6 |
| cytochrome p450 | AMED_RS40875 | Not Available | Negative | 8781594 - 8782805 | 44068.7 |
| preprotein translocase subunit seca | AMED_RS40880 | Not Available | Negative | 8782888 - 8785782 | 107722.0 |
| ribosome hibernation-promoting factor, hpf/yfia family | AMED_RS40885 | Not Available | Negative | 8785989 - 8786675 | 25510.9 |
| hypothetical protein | AMED_RS49275 | Not Available | Negative | 8787583 - 8787888 | 10045.3 |
| lpqb family beta-propeller domain-containing protein | AMED_RS40895 | Not Available | Negative | 8788602 - 8790338 | 61098.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
