Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator | AMED_RS40800 | Not Available | Positive | 8769174 - 8769428 | 9200.75 |
| sensor histidine kinase | AMED_RS40805 | Not Available | Negative | 8769784 - 8771304 | 55162.2 |
| mycothiol system anti-sigma-r factor | AMED_RS40810 | Not Available | Negative | 8771521 - 8771841 | 11871.0 |
| sigma-70 family rna polymerase sigma factor | AMED_RS40815 | Not Available | Negative | 8771838 - 8772461 | 23392.6 |
| cys-trna(pro) deacylase | AMED_RS40820 | Not Available | Positive | 8772654 - 8773130 | 16186.7 |
| alpha/beta family hydrolase | AMED_RS40825 | Not Available | Negative | 8773272 - 8773880 | 21371.5 |
| sos response-associated peptidase | AMED_RS40830 | Not Available | Negative | 8773877 - 8774635 | 28347.4 |
| ribosome small subunit-dependent gtpase a | AMED_RS40835 | Not Available | Positive | 8774813 - 8775835 | 36027.9 |
| hypothetical protein | AMED_RS40840 | Not Available | Positive | 8775937 - 8776821 | 30871.7 |
| hypothetical protein | AMED_RS40845 | Not Available | Positive | 8776892 - 8777641 | 25805.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
