Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | AMED_RS40750 | Not Available | Negative | 8761679 - 8762860 | 40356.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | AMED_RS40755 | Not Available | Positive | 8763221 - 8763826 | 22353.4 |
| srpbcc family protein | AMED_RS40760 | Not Available | Positive | 8763886 - 8764362 | 16924.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS40765 | Not Available | Positive | 8764359 - 8764793 | 15792.0 |
| hypothetical protein | AMED_RS40770 | Not Available | Positive | 8764863 - 8765525 | 23369.9 |
| hotdog fold domain-containing protein | AMED_RS40775 | Not Available | Negative | 8765522 - 8765995 | 17331.2 |
| acid phosphatase | AMED_RS40780 | Not Available | Positive | 8766079 - 8766666 | 20822.6 |
| gnat family n-acetyltransferase | AMED_RS40785 | Not Available | Positive | 8766668 - 8767150 | 17666.0 |
| membrane protein | AMED_RS40790 | Not Available | Negative | 8767152 - 8767622 | 16201.8 |
| diacylglycerol kinase family protein | AMED_RS40795 | Not Available | Positive | 8767973 - 8768899 | 32754.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
