Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactosyltransferase-related protein | AMED_RS40700 | Not Available | Positive | 8752054 - 8753334 | 46699.1 |
| mfs transporter | AMED_RS40705 | Not Available | Positive | 8753345 - 8754535 | 40506.2 |
| gnat family n-acetyltransferase | AMED_RS40710 | Not Available | Positive | 8754589 - 8755107 | 17830.4 |
| llm class flavin-dependent oxidoreductase | AMED_RS40715 | Not Available | Positive | 8755121 - 8756101 | 34144.0 |
| lyse family translocator | AMED_RS40720 | Not Available | Positive | 8756156 - 8756761 | 21192.6 |
| abc transporter substrate-binding protein | AMED_RS40725 | Not Available | Negative | 8756758 - 8757630 | 30704.7 |
| abc transporter permease | AMED_RS40730 | Not Available | Negative | 8757627 - 8758310 | 23526.4 |
| abc transporter permease | AMED_RS40735 | Not Available | Negative | 8758307 - 8758966 | 22973.9 |
| abc transporter atp-binding protein | AMED_RS40740 | Not Available | Negative | 8759041 - 8760126 | 38559.4 |
| bis-aminopropyl spermidine synthase family protein | AMED_RS40745 | Not Available | Positive | 8760220 - 8761626 | 50491.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
