Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase superfamily protein | AMED_RS40600 | Not Available | Negative | 8728718 - 8729101 | 14257.5 |
| padr family transcriptional regulator | AMED_RS40605 | Not Available | Positive | 8729161 - 8729499 | 11389.6 |
| voc family protein | AMED_RS40610 | Not Available | Positive | 8729496 - 8729990 | 17409.8 |
| hypothetical protein | AMED_RS40615 | Not Available | Negative | 8729991 - 8730392 | 14265.1 |
| trans-aconitate 2-methyltransferase | AMED_RS40620 | Not Available | Negative | 8730764 - 8731384 | 22230.3 |
| cdar family transcriptional regulator | AMED_RS40625 | Not Available | Positive | 8731435 - 8732991 | 54746.9 |
| zinc metalloprotease | AMED_RS40630 | Not Available | Positive | 8733156 - 8734073 | 31826.6 |
| zinc-binding dehydrogenase | AMED_RS40635 | Not Available | Negative | 8734528 - 8735463 | 30713.8 |
| alanine dehydrogenase | AMED_RS40640 | Not Available | Positive | 8735637 - 8736752 | 38768.5 |
| hypothetical protein | AMED_RS40645 | Not Available | Negative | 8736755 - 8737018 | 9593.77 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
