Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | AMED_RS03980 | Not Available | Positive | 827197 - 828708 | 52017.9 |
| hypothetical protein | AMED_RS03985 | Not Available | Positive | 828860 - 829387 | 18222.4 |
| guab3 family imp dehydrogenase-related protein | AMED_RS03990 | Not Available | Positive | 829465 - 830598 | 39654.5 |
| duf397 domain-containing protein | AMED_RS03995 | Not Available | Negative | 830582 - 830776 | 6794.13 |
| gmc family oxidoreductase | AMED_RS04000 | Not Available | Positive | 830931 - 832643 | 61476.0 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS04005 | Not Available | Positive | 832654 - 833361 | 25066.6 |
| fad-binding oxidoreductase | AMED_RS04010 | Not Available | Positive | 833433 - 834938 | 51129.5 |
| aldehyde dehydrogenase family protein | AMED_RS04015 | Not Available | Negative | 834990 - 836435 | 50411.0 |
| zinc-dependent alcohol dehydrogenase family protein | AMED_RS04020 | Not Available | Negative | 836491 - 837525 | 36364.7 |
| rhomboid family intramembrane serine protease | AMED_RS04025 | Not Available | Positive | 837646 - 838251 | 21428.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
