Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | AMED_RS40550 | Not Available | Negative | 8717386 - 8719371 | 69882.3 |
| carboxyl transferase domain-containing protein | AMED_RS40555 | Not Available | Negative | 8719377 - 8720990 | 57445.4 |
| sgnh/gdsl hydrolase family protein | AMED_RS40560 | Not Available | Negative | 8721117 - 8721887 | 26024.2 |
| hypothetical protein | AMED_RS40565 | Not Available | Positive | 8722200 - 8722667 | 15333.1 |
| tetr/acrr family transcriptional regulator | AMED_RS40570 | Not Available | Positive | 8722737 - 8723324 | 21243.4 |
| hypothetical protein | AMED_RS40575 | Not Available | Positive | 8723374 - 8723880 | 17958.0 |
| duf2306 domain-containing protein | AMED_RS40580 | Not Available | Negative | 8723887 - 8724498 | 22120.7 |
| homoserine o-acetyltransferase | AMED_RS40585 | Not Available | Negative | 8724575 - 8725693 | 38459.4 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | AMED_RS40590 | Not Available | Negative | 8725690 - 8726994 | 46107.3 |
| aklavinone 12-hydroxylase rdme | AMED_RS40595 | Not Available | Positive | 8727171 - 8728721 | 54992.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
