Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | AMED_RS40450 | Not Available | Positive | 8701659 - 8702864 | 43030.3 |
| hypothetical protein | AMED_RS40455 | Not Available | Negative | 8703074 - 8703412 | 11996.0 |
| amed_5909 family protein | AMED_RS40460 | Not Available | Negative | 8703684 - 8703914 | 8742.36 |
| hypothetical protein | AMED_RS40465 | Not Available | Negative | 8703901 - 8704167 | 9243.99 |
| metal-dependent hydrolase | AMED_RS40470 | Not Available | Negative | 8704414 - 8704776 | 13219.4 |
| is3 family transposase | AMED_RS40475 | Not Available | Negative | 8704817 - 8705734 | 33551.6 |
| is3 family transposase | AMED_RS48355 | Not Available | Negative | 8705734 - 8706057 | 11988.4 |
| hypothetical protein | AMED_RS40485 | Not Available | Negative | 8706230 - 8706457 | 8190.83 |
| duf5919 domain-containing protein | AMED_RS40490 | Not Available | Positive | 8706693 - 8707436 | 27804.2 |
| nudix hydrolase | AMED_RS40495 | Not Available | Positive | 8707445 - 8707915 | 17362.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
