Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | AMED_RS40400 | Not Available | Negative | 8686088 - 8687299 | 42204.6 |
| tetr/acrr family transcriptional regulator | AMED_RS40405 | Not Available | Positive | 8687448 - 8688626 | 42693.1 |
| fxsxx-cooh cyclophane-containing ripp peptide | AMED_RS40410 | Not Available | Positive | 8688737 - 8688919 | 6578.77 |
| hexxh motif domain-containing protein | AMED_RS40415 | Not Available | Positive | 8688930 - 8690843 | 69783.0 |
| fxsxx-cooh system tetratricopeptide repeat protein | AMED_RS40420 | Not Available | Negative | 8690850 - 8695307 | 163907.0 |
| moxr family atpase | AMED_RS40425 | Not Available | Negative | 8695309 - 8696436 | 41589.2 |
| effector-associated domain 2-containing protein | AMED_RS40430 | Not Available | Negative | 8696414 - 8697886 | 54539.4 |
| effector-associated domain 2-containing protein | AMED_RS40435 | Not Available | Negative | 8697997 - 8698887 | 32719.2 |
| low temperature requirement protein a | AMED_RS40440 | Not Available | Positive | 8699040 - 8700245 | 43473.2 |
| acyl-coa dehydrogenase family protein | AMED_RS40445 | Not Available | Positive | 8700345 - 8701640 | 44919.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
