Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase large subunit | AMED_RS40350 | Not Available | Positive | 8672265 - 8673827 | 53509.7 |
| sam-dependent methyltransferase | AMED_RS40355 | Not Available | Positive | 8673847 - 8674662 | 30064.7 |
| sam-dependent methyltransferase | AMED_RS40360 | Not Available | Positive | 8674703 - 8675509 | 29774.2 |
| mfs transporter | AMED_RS40365 | Not Available | Negative | 8675506 - 8676918 | 47860.2 |
| duf3761 domain-containing protein | AMED_RS40370 | Not Available | Negative | 8677005 - 8677475 | 15702.2 |
| sensor histidine kinase | AMED_RS40375 | Not Available | Positive | 8677562 - 8678629 | 37496.2 |
| response regulator transcription factor | AMED_RS40380 | Not Available | Positive | 8678637 - 8679302 | 23949.7 |
| mmpl family transporter | AMED_RS40385 | Not Available | Positive | 8679417 - 8681468 | 71718.5 |
| gh92 family glycosyl hydrolase | AMED_RS40390 | Not Available | Negative | 8681465 - 8683798 | 82420.6 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | AMED_RS40395 | Not Available | Negative | 8683908 - 8686079 | 77144.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
