Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AMED_RS40300 | Not Available | Positive | 8662959 - 8663678 | 26017.2 |
| duf4262 domain-containing protein | AMED_RS40305 | Not Available | Negative | 8663959 - 8664423 | 16401.6 |
| tartrate dehydrogenase | AMED_RS40310 | Not Available | Negative | 8664485 - 8665543 | 37715.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | AMED_RS40315 | Not Available | Negative | 8665540 - 8667003 | 51580.1 |
| aspartate aminotransferase family protein | AMED_RS40320 | Not Available | Positive | 8667095 - 8668351 | 44252.8 |
| duf3830 family protein | AMED_RS40325 | Not Available | Positive | 8668354 - 8668851 | 18044.0 |
| aldo/keto reductase | AMED_RS40330 | Not Available | Negative | 8668892 - 8669707 | 29373.1 |
| hypothetical protein | AMED_RS40335 | Not Available | Positive | 8669921 - 8670292 | 13387.3 |
| roadblock/lc7 domain-containing protein | AMED_RS40340 | Not Available | Positive | 8670298 - 8670774 | 16483.9 |
| fad-binding oxidoreductase | AMED_RS40345 | Not Available | Positive | 8670883 - 8672268 | 48379.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
