Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5937 family protein | AMED_RS40200 | Not Available | Negative | 8643827 - 8644813 | 35164.1 |
| hypothetical protein | AMED_RS40205 | Not Available | Positive | 8644932 - 8645147 | 7476.09 |
| gntr family transcriptional regulator | AMED_RS40210 | Not Available | Negative | 8645101 - 8645814 | 26181.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS40215 | Not Available | Negative | 8645819 - 8646604 | 27258.5 |
| hydantoinase b/oxoprolinase family protein | AMED_RS40220 | Not Available | Negative | 8646607 - 8648307 | 59597.7 |
| hydantoinase/oxoprolinase family protein | AMED_RS40225 | Not Available | Negative | 8648331 - 8650352 | 71121.1 |
| thiamine pyrophosphate-binding protein | AMED_RS40230 | Not Available | Negative | 8650349 - 8651971 | 57566.0 |
| metal-dependent hydrolase | AMED_RS40235 | Not Available | Negative | 8652016 - 8652761 | 24862.9 |
| wax ester/triacylglycerol synthase family o-acyltransferase | AMED_RS40240 | Not Available | Positive | 8652854 - 8654218 | 50157.6 |
| pyrroloquinoline quinone precursor peptide pqqa | AMED_RS40245 | Not Available | Positive | 8654336 - 8654422 | 3297.82 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
