Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteasome assembly chaperone family protein | AMED_RS40150 | Not Available | Negative | 8634897 - 8635814 | 33578.3 |
| ph domain-containing protein | AMED_RS40155 | Not Available | Positive | 8635988 - 8636497 | 18863.9 |
| ph domain-containing protein | AMED_RS40160 | Not Available | Positive | 8636494 - 8638056 | 56256.7 |
| family 16 glycoside hydrolase | AMED_RS40165 | Not Available | Positive | 8638134 - 8638838 | 25309.4 |
| iclr family transcriptional regulator | AMED_RS40170 | Not Available | Positive | 8638961 - 8639746 | 28541.3 |
| gnat family n-acetyltransferase | AMED_RS40175 | Not Available | Positive | 8639778 - 8640281 | 18206.7 |
| hypothetical protein | AMED_RS40180 | Not Available | Positive | 8640415 - 8640612 | 7379.0 |
| voc family protein | AMED_RS40185 | Not Available | Positive | 8640612 - 8641028 | 15544.2 |
| aspartate aminotransferase family protein | AMED_RS40190 | Not Available | Negative | 8641245 - 8642513 | 44349.9 |
| caib/baif coa-transferase family protein | AMED_RS40195 | Not Available | Negative | 8642607 - 8643788 | 42030.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
