Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS40100 | Not Available | Positive | 8626379 - 8626639 | 9364.08 |
| atp-binding protein | AMED_RS40105 | Not Available | Negative | 8626739 - 8627191 | 15863.8 |
| pectate lyase | AMED_RS40110 | Not Available | Positive | 8627772 - 8628941 | 40605.6 |
| yggt family protein | AMED_RS40115 | Not Available | Positive | 8629080 - 8629355 | 9788.56 |
| tetr/acrr family transcriptional regulator | AMED_RS40120 | Not Available | Negative | 8629352 - 8630011 | 23585.0 |
| fad-dependent monooxygenase | AMED_RS40125 | Not Available | Positive | 8630127 - 8631356 | 43589.0 |
| mce family protein | AMED_RS40130 | Not Available | Positive | 8631377 - 8632357 | 34191.8 |
| isas1 family transposase | AMED_RS40135 | Not Available | Negative | 8632533 - 8633642 | 40109.3 |
| hypothetical protein | AMED_RS40140 | Not Available | Positive | 8634018 - 8634161 | 5082.99 |
| class i sam-dependent methyltransferase | AMED_RS40145 | Not Available | Negative | 8634166 - 8634897 | 26746.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
