Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsi/cadi family heavy metal resistance metalloenzyme | AMED_RS03930 | Not Available | Positive | 818505 - 818960 | 16014.7 |
| co-chaperone groes | AMED_RS03935 | Not Available | Positive | 819158 - 819451 | 10415.4 |
| chaperonin groel | AMED_RS03940 | Not Available | Positive | 819549 - 821162 | 56180.1 |
| whib family transcriptional regulator | AMED_RS03945 | Not Available | Negative | 821322 - 821642 | 11728.0 |
| merr family transcriptional regulator | AMED_RS03950 | Not Available | Positive | 821834 - 822778 | 33347.1 |
| hypothetical protein | AMED_RS03955 | Not Available | Positive | 823054 - 823908 | 29305.7 |
| response regulator transcription factor | AMED_RS03960 | Not Available | Positive | 824040 - 824636 | 21243.5 |
| sigma-70 family rna polymerase sigma factor | AMED_RS03965 | Not Available | Positive | 825074 - 825646 | 20429.5 |
| anti-sigma-d factor rsda | AMED_RS03970 | Not Available | Positive | 825647 - 826585 | 31647.7 |
| duf5319 domain-containing protein | AMED_RS03975 | Not Available | Negative | 826652 - 827047 | 14609.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
