Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfkb family carbohydrate kinase | AMED_RS39995 | Not Available | Positive | 8592210 - 8593145 | 32605.7 |
| 5'/3'-nucleotidase sure | AMED_RS40000 | Not Available | Positive | 8593133 - 8593873 | 24589.1 |
| hypothetical protein | AMED_RS40010 | Not Available | Positive | 8594594 - 8595034 | 15239.2 |
| btad domain-containing putative transcriptional regulator | AMED_RS40015 | Not Available | Positive | 8595256 - 8598339 | 112137.0 |
| cytochrome p450 | AMED_RS40020 | Not Available | Positive | 8599005 - 8600330 | 48895.0 |
| hypothetical protein | AMED_RS40025 | Not Available | Positive | 8600327 - 8601484 | 44146.1 |
| glycoside hydrolase family 28 protein | AMED_RS40030 | Not Available | Negative | 8601612 - 8603162 | 55199.1 |
| pqq-dependent sugar dehydrogenase | AMED_RS40035 | Not Available | Negative | 8603277 - 8605361 | 72499.0 |
| ricin-type beta-trefoil lectin domain protein | AMED_RS40040 | Not Available | Negative | 8605565 - 8607145 | 55128.0 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | AMED_RS40045 | Not Available | Positive | 8608380 - 8609831 | 52006.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
