Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS49245 | Not Available | Positive | 8586726 - 8587004 | 9872.76 |
| nuclear transport factor 2 family protein | AMED_RS39955 | Not Available | Negative | 8586983 - 8587348 | 13401.9 |
| hypothetical protein | AMED_RS49250 | Not Available | Negative | 8587335 - 8587505 | 5998.38 |
| hypothetical protein | AMED_RS49255 | Not Available | Positive | 8587636 - 8587782 | 5225.64 |
| is3 family transposase | AMED_RS48350 | Not Available | Positive | 8588046 - 8588369 | 11988.4 |
| is3 family transposase | AMED_RS39970 | Not Available | Positive | 8588369 - 8589286 | 33551.6 |
| hypothetical protein | AMED_RS39975 | Not Available | Negative | 8589358 - 8589519 | 5739.73 |
| hypothetical protein | AMED_RS39980 | Not Available | Positive | 8589740 - 8590033 | 10777.8 |
| alkaline phosphatase phox | AMED_RS39985 | Not Available | Negative | 8590078 - 8591730 | 57920.9 |
| hypothetical protein | AMED_RS49260 | Not Available | Positive | 8592013 - 8592180 | 5568.18 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
