Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | AMED_RS39900 | Not Available | Negative | 8578164 - 8579084 | 31808.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS39905 | Not Available | Negative | 8579238 - 8579657 | 15192.5 |
| sdr family oxidoreductase | AMED_RS39910 | Not Available | Positive | 8579764 - 8580600 | 28780.1 |
| epoxide hydrolase family protein | AMED_RS39915 | Not Available | Negative | 8580597 - 8581697 | 40646.5 |
| Trna-arg | Not Available | Not Available | Positive | 8581848 - 8581920 | Not Available |
| tyrosine-type recombinase/integrase | AMED_RS39925 | Not Available | Negative | 8582051 - 8582779 | 26790.7 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS39930 | Not Available | Positive | 8582929 - 8583900 | 34989.0 |
| hypothetical protein | AMED_RS49240 | Not Available | Negative | 8584095 - 8584274 | 6578.13 |
| tigr03086 family metal-binding protein | AMED_RS39940 | Not Available | Negative | 8585005 - 8585574 | 19925.5 |
| helix-turn-helix domain-containing protein | AMED_RS39945 | Not Available | Positive | 8585639 - 8586382 | 27999.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
