Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | AMED_RS39850 | Not Available | Negative | 8566837 - 8567067 | 8501.05 |
| transcription termination factor rho | AMED_RS39855 | Not Available | Negative | 8567250 - 8569253 | 72245.5 |
| homoserine kinase | AMED_RS39860 | Not Available | Negative | 8569664 - 8570548 | 29683.4 |
| threonine synthase | AMED_RS39865 | Not Available | Negative | 8570545 - 8571606 | 36549.7 |
| homoserine dehydrogenase | AMED_RS39870 | Not Available | Negative | 8571603 - 8572928 | 45492.0 |
| diaminopimelate decarboxylase | AMED_RS39875 | Not Available | Negative | 8572935 - 8574365 | 51150.6 |
| arginine--trna ligase | AMED_RS39880 | Not Available | Negative | 8574369 - 8576030 | 59547.4 |
| duf3105 domain-containing protein | AMED_RS39885 | Not Available | Positive | 8576227 - 8577045 | 28503.7 |
| duf305 domain-containing protein | AMED_RS39890 | Not Available | Positive | 8577042 - 8577755 | 25629.9 |
| rip homotypic interaction motif-containing protein | AMED_RS39895 | Not Available | Negative | 8577759 - 8578097 | 11479.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
