Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | AMED_RS39800 | Not Available | Negative | 8555502 - 8556287 | 28420.6 |
| hypothetical protein | AMED_RS39805 | Not Available | Negative | 8556798 - 8557241 | 15218.5 |
| glycosyltransferase family 4 protein | AMED_RS39810 | Not Available | Negative | 8557289 - 8558446 | 40074.9 |
| l-threonylcarbamoyladenylate synthase | AMED_RS39815 | Not Available | Negative | 8558521 - 8559171 | 22087.5 |
| m6 family metalloprotease domain-containing protein | AMED_RS39820 | Not Available | Positive | 8559461 - 8561434 | 70523.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | AMED_RS39825 | Not Available | Negative | 8561549 - 8562415 | 30660.1 |
| glycosyltransferase family 2 protein | AMED_RS39830 | Not Available | Positive | 8562934 - 8563938 | 37405.4 |
| gtra family protein | AMED_RS39835 | Not Available | Positive | 8563935 - 8564366 | 15476.2 |
| mannosyltransferase family protein | AMED_RS39840 | Not Available | Positive | 8564359 - 8565627 | 46600.5 |
| peptide chain release factor 1 | AMED_RS39845 | Not Available | Negative | 8565685 - 8566755 | 39099.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
