Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | AMED_RS39750 | Not Available | Positive | 8546837 - 8547409 | 20723.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AMED_RS39755 | Not Available | Negative | 8547406 - 8548644 | 43869.4 |
| duf2550 domain-containing protein | AMED_RS39760 | Not Available | Negative | 8548747 - 8549181 | 16146.4 |
| f0f1 atp synthase subunit epsilon | AMED_RS39765 | Not Available | Negative | 8549207 - 8549572 | 12331.5 |
| f0f1 atp synthase subunit beta | AMED_RS39770 | Not Available | Negative | 8549687 - 8551114 | 52073.1 |
| f0f1 atp synthase subunit gamma | AMED_RS39775 | Not Available | Negative | 8551114 - 8552052 | 33667.9 |
| f0f1 atp synthase subunit alpha | AMED_RS39780 | Not Available | Negative | 8552064 - 8553704 | 58799.6 |
| f0f1 atp synthase subunit delta | AMED_RS39785 | Not Available | Negative | 8553762 - 8554586 | 29000.6 |
| f0f1 atp synthase subunit b | AMED_RS39790 | Not Available | Negative | 8554592 - 8555152 | 20293.2 |
| f-type h+-transporting atpase subunit c | AMED_RS39795 | Not Available | Negative | 8555183 - 8555446 | 8554.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
