Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein meaa | AMED_RS39700 | Not Available | Negative | 8537797 - 8539815 | 73193.0 |
| hypothetical protein | AMED_RS39705 | Not Available | Negative | 8539901 - 8540416 | 18773.1 |
| ph domain-containing protein | AMED_RS39710 | Not Available | Negative | 8540477 - 8540998 | 17864.9 |
| lyse family translocator | AMED_RS39715 | Not Available | Positive | 8541142 - 8541768 | 22328.8 |
| lyse family translocator | AMED_RS39720 | Not Available | Positive | 8541768 - 8542394 | 22228.4 |
| s9 family peptidase | AMED_RS39725 | Not Available | Negative | 8542391 - 8543581 | 43510.1 |
| nmra family nad(p)-binding protein | AMED_RS39730 | Not Available | Negative | 8543578 - 8544396 | 28790.0 |
| nuclear transport factor 2 family protein | AMED_RS39735 | Not Available | Negative | 8544389 - 8544871 | 17661.1 |
| tetr/acrr family transcriptional regulator | AMED_RS39740 | Not Available | Positive | 8544915 - 8545499 | 21267.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AMED_RS39745 | Not Available | Negative | 8545501 - 8546775 | 44920.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
