Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | AMED_RS39650 | Not Available | Negative | 8529922 - 8531619 | 60433.7 |
| hypothetical protein | AMED_RS39655 | Not Available | Negative | 8531831 - 8532607 | 28920.4 |
| duf1653 domain-containing protein | AMED_RS39660 | Not Available | Negative | 8532992 - 8533198 | 7869.39 |
| endonuclease nucs | AMED_RS39665 | Not Available | Negative | 8533200 - 8533859 | 24620.7 |
| nudix hydrolase | AMED_RS39670 | Not Available | Positive | 8533897 - 8534442 | 20444.1 |
| duf2867 domain-containing protein | AMED_RS39675 | Not Available | Negative | 8534414 - 8534878 | 17097.6 |
| tetr/acrr family transcriptional regulator | AMED_RS39680 | Not Available | Negative | 8534875 - 8535375 | 18116.9 |
| enoyl-coa hydratase-related protein | AMED_RS39685 | Not Available | Negative | 8535440 - 8536207 | 26917.4 |
| glxa family transcriptional regulator | AMED_RS39690 | Not Available | Negative | 8536189 - 8537172 | 34411.4 |
| cysteine hydrolase family protein | AMED_RS39695 | Not Available | Positive | 8537244 - 8537804 | 19969.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
