Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | AMED_RS39600 | Not Available | Negative | 8522102 - 8522566 | 17080.4 |
| llm class flavin-dependent oxidoreductase | AMED_RS39605 | Not Available | Positive | 8522660 - 8523499 | 30470.6 |
| nucleoside deaminase | AMED_RS39610 | Not Available | Positive | 8523496 - 8523921 | 15544.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | AMED_RS39615 | Not Available | Positive | 8523918 - 8524328 | 14506.1 |
| 3-hydroxyacyl-coa dehydrogenase family protein | AMED_RS39620 | Not Available | Negative | 8524329 - 8526095 | 62260.5 |
| dihydroxyacetone kinase phosphoryl donor subunit dham | AMED_RS39625 | Not Available | Negative | 8526214 - 8526885 | 22449.3 |
| dihydroxyacetone kinase subunit dhal | AMED_RS39630 | Not Available | Negative | 8526882 - 8527511 | 20465.3 |
| dihydroxyacetone kinase subunit dhak | AMED_RS39635 | Not Available | Negative | 8527511 - 8528512 | 34566.4 |
| duf3558 domain-containing protein | AMED_RS39640 | Not Available | Negative | 8528588 - 8529580 | 34208.5 |
| hypothetical protein | AMED_RS39645 | Not Available | Negative | 8529628 - 8529912 | 9911.14 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
