Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxtg cell wall anchor domain-containing protein | AMED_RS03880 | Not Available | Negative | 810161 - 810340 | 6000.5 |
| choice-of-anchor p family protein | AMED_RS03885 | Not Available | Negative | 810352 - 811119 | 24733.1 |
| exosortase p | AMED_RS03890 | Not Available | Positive | 811481 - 811990 | 18412.9 |
| glycosyltransferase | AMED_RS03895 | Not Available | Positive | 811987 - 813363 | 51315.1 |
| n-acetylmuramoyl-l-alanine amidase | AMED_RS03900 | Not Available | Negative | 813385 - 815262 | 67447.5 |
| methyltransferase domain-containing protein | AMED_RS03905 | Not Available | Negative | 815493 - 816218 | 25163.0 |
| helix-turn-helix transcriptional regulator | AMED_RS03910 | Not Available | Negative | 816215 - 816547 | 11911.5 |
| arsenate reductase arsc | AMED_RS03915 | Not Available | Negative | 816600 - 817007 | 14397.3 |
| acr3 family arsenite efflux transporter | AMED_RS03920 | Not Available | Negative | 817004 - 818068 | 38104.7 |
| metalloregulator arsr/smtb family transcription factor | AMED_RS03925 | Not Available | Negative | 818065 - 818421 | 12754.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
