Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease | AMED_RS00300 | Not Available | Negative | 61553 - 62284 | 25182.7 |
| trypsin-like serine protease | AMED_RS00305 | Not Available | Negative | 62400 - 63152 | 25151.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AMED_RS00310 | Not Available | Negative | 63304 - 63678 | 12902.4 |
| penicillin acylase family protein | AMED_RS00315 | Not Available | Positive | 63820 - 67038 | 113841.0 |
| plp-dependent aspartate aminotransferase family protein | AMED_RS00320 | Not Available | Positive | 67097 - 68137 | 36445.5 |
| hypothetical protein | AMED_RS00325 | Not Available | Positive | 68199 - 68996 | 26249.8 |
| class f sortase | AMED_RS00330 | Not Available | Positive | 68993 - 69577 | 20244.5 |
| patatin-like phospholipase family protein | AMED_RS00335 | Not Available | Negative | 69563 - 70603 | 38066.7 |
| fadr/gntr family transcriptional regulator | AMED_RS00340 | Not Available | Negative | 70724 - 71467 | 27121.7 |
| abc transporter substrate-binding protein | AMED_RS00345 | Not Available | Positive | 71595 - 73085 | 53842.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
