Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS39550 | Not Available | Negative | 8515253 - 8516020 | 27384.8 |
| gnat family n-acetyltransferase | AMED_RS39555 | Not Available | Positive | 8516019 - 8516558 | 20255.1 |
| hypothetical protein | AMED_RS39560 | Not Available | Negative | 8516653 - 8516958 | 11565.5 |
| transposase | AMED_RS39565 | Not Available | Positive | 8517306 - 8517596 | 11061.1 |
| is3 family transposase | AMED_RS39570 | Not Available | Positive | 8517593 - 8518474 | 33091.7 |
| alkaline phosphatase family protein | AMED_RS39575 | Not Available | Negative | 8518555 - 8519679 | 38886.4 |
| zinc ribbon domain-containing protein | AMED_RS39580 | Not Available | Positive | 8519725 - 8519931 | 6725.99 |
| plp-dependent aspartate aminotransferase family protein | AMED_RS39585 | Not Available | Negative | 8519938 - 8521056 | 38673.3 |
| lrp/asnc family transcriptional regulator | AMED_RS39590 | Not Available | Positive | 8521115 - 8521591 | 17248.7 |
| aaa family atpase | AMED_RS39595 | Not Available | Negative | 8521594 - 8522118 | 20018.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
