Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent cysteine synthase family protein | AMED_RS39450 | Not Available | Negative | 8499150 - 8500100 | 33817.3 |
| moad/this family protein | AMED_RS39455 | Not Available | Negative | 8500104 - 8500376 | 9610.53 |
| mov34/mpn/pad-1 family protein | AMED_RS39460 | Not Available | Negative | 8500443 - 8500850 | 15280.8 |
| hypothetical protein | AMED_RS39465 | Not Available | Positive | 8500932 - 8501312 | 14264.4 |
| p1 family peptidase | AMED_RS39470 | Not Available | Negative | 8501297 - 8502292 | 33268.2 |
| duf2017 domain-containing protein | AMED_RS39475 | Not Available | Negative | 8502289 - 8502846 | 20421.0 |
| atp-dependent clp protease adapter clps | AMED_RS39480 | Not Available | Negative | 8502843 - 8503142 | 10910.9 |
| nicotinate phosphoribosyltransferase | AMED_RS39485 | Not Available | Positive | 8503217 - 8504518 | 45800.3 |
| isochorismatase family protein | AMED_RS39490 | Not Available | Positive | 8504546 - 8505124 | 19568.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AMED_RS39495 | Not Available | Positive | 8505121 - 8505765 | 21470.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
