Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | AMED_RS39400 | Not Available | Positive | 8489536 - 8490009 | 17067.1 |
| nacht domain-containing protein | AMED_RS39405 | Not Available | Positive | 8490088 - 8493279 | 117343.0 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | AMED_RS39410 | Not Available | Negative | 8493276 - 8493878 | 21143.1 |
| ribonuclease ph | AMED_RS39415 | Not Available | Negative | 8493875 - 8494651 | 27426.5 |
| mbl fold metallo-hydrolase | AMED_RS39420 | Not Available | Negative | 8494674 - 8495441 | 26826.9 |
| glutamate racemase | AMED_RS39425 | Not Available | Negative | 8495471 - 8496277 | 28265.0 |
| rhomboid family intramembrane serine protease | AMED_RS39430 | Not Available | Negative | 8496274 - 8496903 | 21427.7 |
| arylamine n-acetyltransferase | AMED_RS39435 | Not Available | Positive | 8496995 - 8497846 | 30593.8 |
| aspartate/glutamate racemase family protein | AMED_RS39440 | Not Available | Negative | 8497836 - 8498558 | 25399.7 |
| mbl fold metallo-hydrolase | AMED_RS39445 | Not Available | Positive | 8498569 - 8499000 | 15089.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
