Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS39350 | Not Available | Positive | 8482470 - 8482895 | 14855.8 |
| duf3618 domain-containing protein | AMED_RS39355 | Not Available | Negative | 8482899 - 8483120 | 7945.94 |
| Trna-leu | Not Available | Not Available | Positive | 8483220 - 8483293 | Not Available |
| saccharopine dehydrogenase nadp-binding domain-containing protein | AMED_RS39365 | Not Available | Negative | 8483407 - 8484447 | 36596.6 |
| helix-turn-helix domain-containing protein | AMED_RS39370 | Not Available | Positive | 8484518 - 8485435 | 32689.1 |
| aldo/keto reductase | AMED_RS39375 | Not Available | Negative | 8485442 - 8486524 | 38606.1 |
| arac family transcriptional regulator | AMED_RS39380 | Not Available | Positive | 8486643 - 8487521 | 31646.6 |
| hypothetical protein | AMED_RS39385 | Not Available | Positive | 8487571 - 8488458 | 31136.6 |
| hypothetical protein | AMED_RS39390 | Not Available | Positive | 8488588 - 8488770 | 6902.29 |
| hypothetical protein | AMED_RS39395 | Not Available | Positive | 8488961 - 8489512 | 18289.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
