Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | AMED_RS39300 | Not Available | Positive | 8468169 - 8470028 | 66271.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS39305 | Not Available | Negative | 8470025 - 8470924 | 31599.8 |
| mfs transporter | AMED_RS39310 | Not Available | Positive | 8471229 - 8472476 | 42940.0 |
| diguanylate cyclase | AMED_RS39315 | Not Available | Positive | 8472761 - 8474203 | 51662.9 |
| hypothetical protein | AMED_RS39320 | Not Available | Negative | 8474181 - 8475308 | 38787.3 |
| phospholipase a2 | AMED_RS39325 | Not Available | Positive | 8475473 - 8477626 | 74640.8 |
| lcp family protein | AMED_RS39330 | Not Available | Positive | 8477772 - 8479445 | 58355.6 |
| helix-turn-helix domain-containing protein | AMED_RS39335 | Not Available | Positive | 8479625 - 8480095 | 18038.9 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS39340 | Not Available | Negative | 8480138 - 8481595 | 54664.4 |
| tetr/acrr family transcriptional regulator | AMED_RS39345 | Not Available | Positive | 8481666 - 8482265 | 22388.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
