Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS39250 | Not Available | Positive | 8459698 - 8460492 | 28208.9 |
| o-acetyl-adp-ribose deacetylase | AMED_RS39255 | Not Available | Positive | 8460522 - 8461040 | 18017.7 |
| had family hydrolase | AMED_RS39260 | Not Available | Positive | 8461069 - 8461716 | 22978.3 |
| nudix domain-containing protein | AMED_RS39265 | Not Available | Negative | 8461706 - 8462173 | 16885.1 |
| doxx family protein | AMED_RS39270 | Not Available | Positive | 8462285 - 8462722 | 15309.9 |
| atp/gtp-binding protein | AMED_RS39275 | Not Available | Negative | 8462738 - 8463340 | 21679.8 |
| duf742 domain-containing protein | AMED_RS39280 | Not Available | Negative | 8463321 - 8463692 | 13495.5 |
| roadblock/lc7 domain-containing protein | AMED_RS39285 | Not Available | Negative | 8463689 - 8464108 | 14564.5 |
| atp-binding protein | AMED_RS39290 | Not Available | Negative | 8464108 - 8466702 | 93615.1 |
| hypothetical protein | AMED_RS39295 | Not Available | Negative | 8467300 - 8467956 | 23854.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
