Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS39200 | Not Available | Negative | 8452060 - 8452758 | 24562.6 |
| sdr family oxidoreductase | AMED_RS39205 | Not Available | Negative | 8452847 - 8453542 | 23807.6 |
| lysr family transcriptional regulator | AMED_RS39210 | Not Available | Positive | 8453646 - 8454560 | 31619.2 |
| lytic transglycosylase domain-containing protein | AMED_RS39215 | Not Available | Positive | 8454756 - 8455934 | 39465.7 |
| hypothetical protein | AMED_RS39220 | Not Available | Positive | 8455940 - 8456197 | 9769.67 |
| tetr/acrr family transcriptional regulator | AMED_RS39225 | Not Available | Negative | 8456194 - 8456964 | 27944.2 |
| duf1992 domain-containing protein | AMED_RS39230 | Not Available | Positive | 8457027 - 8457440 | 15639.6 |
| membrane protein insertase yidc | AMED_RS39235 | Not Available | Negative | 8457423 - 8458067 | 22761.4 |
| duf6412 domain-containing protein | AMED_RS39240 | Not Available | Negative | 8458146 - 8458418 | 9621.79 |
| metallophosphoesterase | AMED_RS39245 | Not Available | Positive | 8458489 - 8459610 | 39941.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
