Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS39155 | Not Available | Positive | 8443188 - 8443652 | 16768.9 |
| hypothetical protein | AMED_RS39160 | Not Available | Positive | 8443768 - 8444658 | 30081.9 |
| hypothetical protein | AMED_RS39165 | Not Available | Positive | 8444890 - 8445219 | 12075.4 |
| mdr family mfs transporter | AMED_RS39170 | Not Available | Positive | 8445311 - 8446696 | 46909.9 |
| alpha/beta hydrolase | AMED_RS39175 | Not Available | Positive | 8446779 - 8448266 | 53138.6 |
| hypothetical protein | AMED_RS48160 | Not Available | Positive | 8448407 - 8448556 | 5212.24 |
| transposase | AMED_RS39180 | Not Available | Positive | 8448691 - 8449248 | 19686.7 |
| transposase | AMED_RS39185 | Not Available | Positive | 8449245 - 8449424 | 6669.19 |
| hnh endonuclease signature motif containing protein | AMED_RS39190 | Not Available | Positive | 8449480 - 8450709 | 44177.1 |
| gnat family n-acetyltransferase | AMED_RS39195 | Not Available | Positive | 8451617 - 8452057 | 16232.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
