Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase/quinone reductase family protein | AMED_RS39105 | Not Available | Negative | 8433354 - 8434076 | 27099.5 |
| hypothetical protein | AMED_RS39110 | Not Available | Negative | 8434250 - 8435089 | 30844.9 |
| amp-binding protein | AMED_RS39115 | Not Available | Positive | 8435150 - 8436673 | 55330.6 |
| molybdopterin-dependent oxidoreductase | AMED_RS39120 | Not Available | Negative | 8436670 - 8438988 | 84222.9 |
| llm class flavin-dependent oxidoreductase | AMED_RS39125 | Not Available | Negative | 8438999 - 8440024 | 36629.7 |
| srpbcc family protein | AMED_RS39130 | Not Available | Negative | 8440021 - 8440512 | 18635.0 |
| helix-turn-helix domain-containing protein | AMED_RS39135 | Not Available | Negative | 8440583 - 8441086 | 19350.2 |
| cupin domain-containing protein | AMED_RS39140 | Not Available | Negative | 8441145 - 8441534 | 14145.7 |
| helix-turn-helix domain-containing protein | AMED_RS39145 | Not Available | Positive | 8441578 - 8442543 | 34712.8 |
| tetr/acrr family transcriptional regulator | AMED_RS49615 | Not Available | Negative | 8442500 - 8443117 | 21823.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
