Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | AMED_RS03830 | Not Available | Positive | 799894 - 801009 | 39737.4 |
| alpha/beta fold hydrolase | AMED_RS03835 | Not Available | Positive | 801006 - 802103 | 39588.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | AMED_RS03840 | Not Available | Positive | 802100 - 802561 | 16411.3 |
| serine hydrolase | AMED_RS03845 | Not Available | Negative | 802644 - 803642 | 35200.1 |
| carboxyl transferase domain-containing protein | AMED_RS03850 | Not Available | Negative | 803717 - 805045 | 45631.1 |
| acyl-coa synthetase | AMED_RS03855 | Not Available | Negative | 805038 - 806462 | 49568.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | AMED_RS03860 | Not Available | Positive | 806562 - 807227 | 22601.1 |
| ribosomal protein s18-alanine n-acetyltransferase | AMED_RS03865 | Not Available | Positive | 807224 - 807703 | 17734.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | AMED_RS03870 | Not Available | Positive | 807703 - 808749 | 35494.6 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | AMED_RS03875 | Not Available | Negative | 808870 - 810021 | 40055.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
