Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS39060 | Not Available | Negative | 8426154 - 8426915 | 26419.3 |
| tetr/acrr family transcriptional regulator | AMED_RS39065 | Not Available | Negative | 8426989 - 8427597 | 22083.5 |
| dihydrofolate reductase family protein | AMED_RS39070 | Not Available | Negative | 8427691 - 8428428 | 25482.4 |
| dihydropteroate synthase | AMED_RS39075 | Not Available | Negative | 8428425 - 8429009 | 19489.3 |
| ycii family protein | AMED_RS39080 | Not Available | Negative | 8429227 - 8429526 | 11024.3 |
| hypothetical protein | AMED_RS39085 | Not Available | Positive | 8429739 - 8430647 | 30797.3 |
| hypothetical protein | AMED_RS49610 | Not Available | Positive | 8430669 - 8430803 | 4863.69 |
| phosphotransferase enzyme family protein | AMED_RS39090 | Not Available | Positive | 8430815 - 8431741 | 33844.4 |
| tetr/acrr family transcriptional regulator | AMED_RS39095 | Not Available | Positive | 8431770 - 8432459 | 24810.4 |
| llm class f420-dependent oxidoreductase | AMED_RS39100 | Not Available | Positive | 8432505 - 8433353 | 30178.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
