Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | AMED_RS39015 | Not Available | Negative | 8417670 - 8418059 | 13201.7 |
| metal-dependent hydrolase | AMED_RS49225 | Not Available | Positive | 8418124 - 8418201 | 2914.38 |
| hypothetical protein | AMED_RS39025 | Not Available | Positive | 8418320 - 8418535 | 7365.94 |
| chat domain-containing protein | AMED_RS39030 | Not Available | Negative | 8418532 - 8421141 | 93342.8 |
| hypothetical protein | AMED_RS48155 | Not Available | Negative | 8421235 - 8421393 | 5618.44 |
| serine hydrolase domain-containing protein | AMED_RS39035 | Not Available | Negative | 8421730 - 8422869 | 40111.2 |
| hypothetical protein | AMED_RS39040 | Not Available | Positive | 8422974 - 8423393 | 14301.5 |
| voc family protein | AMED_RS39045 | Not Available | Positive | 8423424 - 8423789 | 13198.5 |
| hypothetical protein | AMED_RS39050 | Not Available | Positive | 8423866 - 8425536 | 61240.1 |
| nudix hydrolase | AMED_RS39055 | Not Available | Positive | 8425552 - 8425953 | 15006.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
