Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | AMED_RS38965 | Not Available | Negative | 8407697 - 8408695 | 34842.6 |
| mce family protein | AMED_RS38970 | Not Available | Negative | 8408695 - 8409690 | 35300.2 |
| mce family protein | AMED_RS38975 | Not Available | Negative | 8409687 - 8410703 | 35448.3 |
| mce family protein | AMED_RS38980 | Not Available | Negative | 8410700 - 8411890 | 42168.6 |
| abc transporter permease | AMED_RS38985 | Not Available | Negative | 8411887 - 8412702 | 28542.4 |
| abc transporter permease | AMED_RS38990 | Not Available | Negative | 8412703 - 8413497 | 27389.1 |
| hypothetical protein | AMED_RS38995 | Not Available | Negative | 8413494 - 8414222 | 24746.7 |
| duf6801 domain-containing protein | AMED_RS39000 | Not Available | Negative | 8414228 - 8415646 | 48076.1 |
| atp-binding cassette domain-containing protein | AMED_RS39005 | Not Available | Positive | 8415899 - 8416828 | 31992.8 |
| abc transporter permease | AMED_RS39010 | Not Available | Positive | 8416840 - 8417673 | 29309.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
