Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMED_RS38915 | Not Available | Positive | 8397821 - 8399023 | 43057.7 |
| alpha/beta fold hydrolase | AMED_RS38920 | Not Available | Positive | 8399429 - 8400346 | 32352.3 |
| helix-turn-helix domain-containing protein | AMED_RS38925 | Not Available | Positive | 8400563 - 8401927 | 49973.0 |
| cdar family transcriptional regulator | AMED_RS38930 | Not Available | Positive | 8401954 - 8403147 | 43245.3 |
| kr domain-containing protein | AMED_RS38935 | Not Available | Negative | 8403256 - 8404383 | 39434.1 |
| hypothetical protein | AMED_RS38940 | Not Available | Negative | 8404377 - 8404541 | 5859.24 |
| membrane protein | AMED_RS38945 | Not Available | Negative | 8404557 - 8405132 | 20046.9 |
| hypothetical protein | AMED_RS38950 | Not Available | Negative | 8405129 - 8405626 | 17074.1 |
| mlad family protein | AMED_RS38955 | Not Available | Negative | 8405623 - 8406729 | 38416.8 |
| mce family protein | AMED_RS38960 | Not Available | Negative | 8406729 - 8407700 | 33817.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
