Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | AMED_RS38865 | Not Available | Negative | 8386204 - 8386644 | 16421.9 |
| atp-binding protein | AMED_RS38870 | Not Available | Negative | 8386641 - 8388284 | 59582.2 |
| pp2c family protein-serine/threonine phosphatase | AMED_RS38875 | Not Available | Negative | 8388274 - 8389476 | 43209.3 |
| duf2252 family protein | AMED_RS38880 | Not Available | Negative | 8389635 - 8390972 | 47547.1 |
| duf6801 domain-containing protein | AMED_RS38885 | Not Available | Negative | 8391007 - 8392074 | 35231.2 |
| duf6801 domain-containing protein | AMED_RS38890 | Not Available | Negative | 8392143 - 8393357 | 40705.3 |
| hypothetical protein | AMED_RS38895 | Not Available | Positive | 8393690 - 8394253 | 19395.1 |
| lipase family protein | AMED_RS38900 | Not Available | Positive | 8394250 - 8395431 | 40851.5 |
| hypothetical protein | AMED_RS38905 | Not Available | Negative | 8395432 - 8396049 | 20929.5 |
| helix-turn-helix domain-containing protein | AMED_RS49605 | Not Available | Negative | 8396410 - 8397642 | 43459.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
