Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | AMED_RS38815 | Not Available | Negative | 8376680 - 8378407 | 58817.5 |
| hypothetical protein | AMED_RS38820 | Not Available | Negative | 8378404 - 8379192 | 27084.2 |
| hypothetical protein | AMED_RS38825 | Not Available | Negative | 8379542 - 8379940 | 12291.3 |
| hypothetical protein | AMED_RS38830 | Not Available | Positive | 8379927 - 8380163 | 8091.69 |
| metalloregulator arsr/smtb family transcription factor | AMED_RS38835 | Not Available | Positive | 8380242 - 8381018 | 29022.4 |
| efem/efeo family lipoprotein | AMED_RS38840 | Not Available | Positive | 8381229 - 8382386 | 40448.4 |
| dyp-type peroxidase | AMED_RS38845 | Not Available | Positive | 8382383 - 8383627 | 43925.0 |
| phospholipase c | AMED_RS38850 | Not Available | Positive | 8383670 - 8385292 | 58842.0 |
| atp-binding protein | AMED_RS38855 | Not Available | Negative | 8385394 - 8385801 | 14413.1 |
| stas domain-containing protein | AMED_RS38860 | Not Available | Negative | 8385813 - 8386169 | 12544.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
