Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo 1,3/1,4-beta-d-glucan glucohydrolase | AMED_RS38765 | Not Available | Positive | 8365236 - 8367824 | 91293.0 |
| hypothetical protein | AMED_RS38770 | Not Available | Negative | 8367882 - 8368313 | 14780.4 |
| hypothetical protein | AMED_RS38775 | Not Available | Negative | 8368322 - 8368807 | 16218.4 |
| response regulator transcription factor | AMED_RS38780 | Not Available | Positive | 8369028 - 8369723 | 26007.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS38785 | Not Available | Positive | 8369713 - 8371521 | 63439.8 |
| 4-hydroxybenzoate 3-monooxygenase | AMED_RS38790 | Not Available | Negative | 8371510 - 8372661 | 41938.9 |
| iclr family transcriptional regulator | AMED_RS38795 | Not Available | Negative | 8372735 - 8373487 | 27008.8 |
| chitinase | AMED_RS38800 | Not Available | Negative | 8373550 - 8375316 | 60557.9 |
| hypothetical protein | AMED_RS38805 | Not Available | Negative | 8375650 - 8376018 | 13402.9 |
| hypothetical protein | AMED_RS38810 | Not Available | Positive | 8376280 - 8376702 | 15718.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
