Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS38615 | Not Available | Negative | 8332193 - 8333650 | 50158.0 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS38620 | Not Available | Positive | 8333737 - 8334111 | 14081.8 |
| is4 family transposase | AMED_RS38625 | Not Available | Negative | 8334128 - 8335510 | 49459.4 |
| s1c family serine protease | AMED_RS38630 | Not Available | Negative | 8335663 - 8337039 | 46704.2 |
| fad-dependent oxidoreductase | AMED_RS38635 | Not Available | Negative | 8337134 - 8339560 | 87914.3 |
| formyltetrahydrofolate deformylase | AMED_RS38640 | Not Available | Negative | 8339585 - 8340427 | 31157.2 |
| sarcosine oxidase subunit gamma | AMED_RS38645 | Not Available | Negative | 8340424 - 8340942 | 18587.2 |
| 2fe-2s iron-sulfur cluster-binding protein | AMED_RS38650 | Not Available | Negative | 8340932 - 8343469 | 91337.7 |
| sarcosine oxidase subunit delta | AMED_RS38655 | Not Available | Negative | 8343466 - 8343744 | 10648.4 |
| sarcosine oxidase subunit beta family protein | AMED_RS38660 | Not Available | Negative | 8343770 - 8344981 | 43224.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
