Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | AMED_RS03780 | Not Available | Positive | 787810 - 788070 | 9458.26 |
| hypothetical protein | AMED_RS03785 | Not Available | Positive | 788225 - 788539 | 10489.2 |
| wxg100 family type vii secretion target | AMED_RS03790 | Not Available | Positive | 788539 - 791055 | 87064.8 |
| hypothetical protein | AMED_RS03795 | Not Available | Positive | 791075 - 791539 | 17200.6 |
| dienelactone hydrolase family protein | AMED_RS03800 | Not Available | Negative | 791578 - 792402 | 28910.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | AMED_RS03805 | Not Available | Positive | 792957 - 794819 | 66857.5 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | AMED_RS03810 | Not Available | Positive | 794846 - 796285 | 48706.3 |
| deor/glpr family dna-binding transcription regulator | AMED_RS03815 | Not Available | Positive | 796501 - 797337 | 30194.7 |
| xylulokinase | AMED_RS03820 | Not Available | Positive | 797327 - 798772 | 49730.4 |
| abc transporter atp-binding protein | AMED_RS03825 | Not Available | Positive | 798776 - 799864 | 38973.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
