Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS38565 | Not Available | Negative | 8316538 - 8318220 | 58288.6 |
| lipopolysaccharide biosynthesis protein | AMED_RS38570 | Not Available | Positive | 8318291 - 8319505 | 41100.4 |
| alpha-(1->3)-arabinofuranosyltransferase | AMED_RS49600 | Not Available | Negative | 8319576 - 8323586 | 141116.0 |
| class i sam-dependent methyltransferase | AMED_RS38580 | Not Available | Positive | 8323712 - 8324386 | 25169.4 |
| hypothetical protein | AMED_RS38585 | Not Available | Negative | 8324380 - 8326125 | 62438.4 |
| substrate-binding and vwa domain-containing protein | AMED_RS38590 | Not Available | Negative | 8326134 - 8327714 | 55152.8 |
| hypothetical protein | AMED_RS38595 | Not Available | Positive | 8327975 - 8328766 | 28074.9 |
| plp-dependent aminotransferase family protein | AMED_RS38600 | Not Available | Negative | 8328770 - 8330170 | 49946.9 |
| carboxymuconolactone decarboxylase family protein | AMED_RS38605 | Not Available | Positive | 8330218 - 8330679 | 16700.0 |
| mfs transporter | AMED_RS38610 | Not Available | Positive | 8330676 - 8332076 | 46431.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
