Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | AMED_RS38515 | Not Available | Positive | 8308706 - 8309335 | 22461.7 |
| cdar family transcriptional regulator | AMED_RS38520 | Not Available | Positive | 8309431 - 8310609 | 42881.6 |
| duf2975 domain-containing protein | AMED_RS38525 | Not Available | Positive | 8310666 - 8311145 | 17412.2 |
| helix-turn-helix transcriptional regulator | AMED_RS38530 | Not Available | Positive | 8311145 - 8311363 | 7941.85 |
| hypothetical protein | AMED_RS38535 | Not Available | Negative | 8311422 - 8311919 | 16910.3 |
| duf3068 domain-containing protein | AMED_RS38540 | Not Available | Positive | 8312191 - 8313258 | 38745.9 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS38545 | Not Available | Negative | 8313255 - 8313950 | 25423.3 |
| glycosyltransferase family 4 protein | AMED_RS38550 | Not Available | Positive | 8314111 - 8315244 | 41614.0 |
| hypothetical protein | AMED_RS38555 | Not Available | Negative | 8315297 - 8316346 | 36420.7 |
| hypothetical protein | AMED_RS38560 | Not Available | Negative | 8316352 - 8316534 | 5987.25 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
