Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | AMED_RS38415 | Not Available | Positive | 8291737 - 8292222 | 18271.6 |
| gmc oxidoreductase | AMED_RS38420 | Not Available | Negative | 8292257 - 8293828 | 55482.8 |
| rna-binding s4 domain-containing protein | AMED_RS38425 | Not Available | Positive | 8294038 - 8294406 | 13580.3 |
| hypothetical protein | AMED_RS38430 | Not Available | Negative | 8294403 - 8294600 | 6924.98 |
| sigma-70 family rna polymerase sigma factor | AMED_RS38435 | Not Available | Positive | 8294704 - 8295198 | 17850.6 |
| cupin domain-containing protein | AMED_RS38440 | Not Available | Positive | 8295215 - 8295517 | 10914.7 |
| rna polymerase sigma factor shba | AMED_RS38445 | Not Available | Negative | 8295522 - 8296157 | 22393.0 |
| hypothetical protein | AMED_RS38450 | Not Available | Negative | 8296392 - 8297183 | 29557.5 |
| hypothetical protein | AMED_RS38455 | Not Available | Positive | 8297691 - 8297867 | 6046.58 |
| amidohydrolase family protein | AMED_RS38460 | Not Available | Negative | 8298028 - 8299077 | 36659.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
