Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | AMED_RS38315 | Not Available | Negative | 8270187 - 8271731 | 55841.6 |
| sugar abc transporter substrate-binding protein | AMED_RS38320 | Not Available | Negative | 8271728 - 8273068 | 47035.8 |
| carbohydrate abc transporter permease | AMED_RS38325 | Not Available | Negative | 8273118 - 8273981 | 31025.5 |
| carbohydrate abc transporter permease | AMED_RS38330 | Not Available | Negative | 8273983 - 8274909 | 33907.0 |
| laci family dna-binding transcriptional regulator | AMED_RS38335 | Not Available | Positive | 8275021 - 8276076 | 37340.1 |
| hypothetical protein | AMED_RS38340 | Not Available | Positive | 8276718 - 8276903 | 6481.29 |
| dsba family oxidoreductase | AMED_RS38345 | Not Available | Negative | 8276878 - 8277504 | 22838.5 |
| qsdr family transcriptional regulator | AMED_RS38350 | Not Available | Positive | 8277739 - 8278338 | 21687.2 |
| lipase | AMED_RS38355 | Not Available | Positive | 8278536 - 8279465 | 32379.0 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS38360 | Not Available | Negative | 8280398 - 8281378 | 33989.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
