Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | AMED_RS38210 | Not Available | Positive | 8248166 - 8248813 | 21991.3 |
| mhyt domain-containing protein | AMED_RS38215 | Not Available | Negative | 8248843 - 8249619 | 27144.0 |
| atp/gtp-binding protein | AMED_RS38220 | Not Available | Negative | 8249638 - 8250177 | 19288.1 |
| duf742 domain-containing protein | AMED_RS38225 | Not Available | Negative | 8250266 - 8250643 | 13390.1 |
| roadblock/lc7 domain-containing protein | AMED_RS38230 | Not Available | Negative | 8250640 - 8251074 | 14843.8 |
| atp-binding protein | AMED_RS38235 | Not Available | Negative | 8251071 - 8253266 | 76752.2 |
| helix-turn-helix transcriptional regulator | AMED_RS38240 | Not Available | Positive | 8253641 - 8254600 | 34849.9 |
| hypothetical protein | AMED_RS38245 | Not Available | Positive | 8254797 - 8255066 | 9411.5 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS38250 | Not Available | Negative | 8255063 - 8256085 | 36675.1 |
| organic hydroperoxide resistance protein | AMED_RS38255 | Not Available | Positive | 8256240 - 8256671 | 14613.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
